ctcRbase

Entry Detail

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General Information

Database ID: BRCA19733 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: USF3 Full Name: upstream transcription factor family member 3 Category: mRNA Synonyms: KIAA2018 Chromosome: chr3 Strand: - Coordinate: Start Site(bp): 113648385 End Site(bp): 113696646 Gene Summary: This gene encodes a large protein that contains a helix-loop-helix domain and a polyglutamine region. A deletion in the polyglutamine region was associated with risk for thyroid carcinoma. [provided by RefSeq, May 2017] External Links: Ensembl ID: ENSG00000176542 HGNC ID: HGNC:30494 Entrez Gene: 205717

Expression Profile of USF3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES NO YES hsa-miR-106a-5p YES NO YES hsa-miR-106b-5p YES NO YES hsa-miR-107 YES NO YES hsa-miR-1197 YES NO YES hsa-miR-124-3p YES NO YES hsa-miR-1297 YES NO YES hsa-miR-147a YES NO NO hsa-miR-155-5p YES YES NO hsa-miR-17-5p YES NO YES hsa-miR-183-5p YES YES YES hsa-miR-186-5p YES NO NO hsa-miR-190a-5p YES NO YES hsa-miR-190b YES NO YES hsa-miR-199a-5p YES NO YES hsa-miR-199b-5p YES NO YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-20a-5p YES NO YES hsa-miR-20b-5p YES NO YES hsa-miR-216a-5p YES YES NO hsa-miR-22-3p YES YES NO hsa-miR-24-3p YES YES YES hsa-miR-26a-5p YES NO YES hsa-miR-26b-5p YES NO YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-300 YES NO YES hsa-miR-329-3p YES NO NO hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES NO NO hsa-miR-370-3p YES YES NO hsa-miR-381-3p YES NO YES hsa-miR-429 YES YES YES hsa-miR-488-3p YES YES NO hsa-miR-506-3p YES NO YES hsa-miR-519d-3p YES NO YES hsa-miR-655-3p YES NO YES hsa-miR-802 YES NO YES hsa-miR-93-5p YES NO YES Display: