Entry Detail



General Information

Database ID:BRCA21209
Cancer Type:breast cancer
Dataset:GSE111065
CTCs/CTM Isolation Method:microfluidics immunofluorescence



Gene Information

ncRNA Symbol:CX3CL1
Full Name:C-X3-C motif chemokine ligand 1
Category:mRNA
Synonyms:ABCD-3|C3Xkine|CXC3|CXC3C|NTN|NTT|SCYD1|fractalkine|neurotactin
Chromosome:chr16
Strand:+
Coordinate:
Start Site(bp):57372458End Site(bp):57385048
Gene Summary:This gene belongs to the CX3C subgroup of chemokines, characterized by the number of amino acids located between the conserved cysteine residues. This is the only member of the CX3C subgroup, which contains three amino acids between cysteine residues, resulting in a Cys-X-X-X-Cys configuration. The encoded protein contains an extended mucin-like stalk with a chemokine domain on top, and exists in both a membrane-anchored form where it acts as a binding molecule, or, in soluble form, as a chemotactic cytokine. The mature form of this protein can be cleaved at the cell surface, yielding different soluble forms that can interact with the G-protein coupled receptor, C-X3-C motif chemokine receptor 1 gene product. This gene plays a role in a wide range of diseases, including cancer, vasculitis, neuropathies, atherosclerosis, inflammatory diseases, and in human immunodeficiency virus infections. [provided by RefSeq, Sep 2017]
External Links:
Ensembl ID:ENSG00000006210
HGNC ID:HGNC:10647
Entrez Gene:6376



Expression Profile of CX3CL1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-106a-5p
YES
YES
NO
hsa-miR-106b-5p
YES
YES
NO
hsa-miR-122-5p
YES
YES
NO
hsa-miR-15a-5p
YES
NO
YES
hsa-miR-15b-5p
YES
NO
YES
hsa-miR-16-5p
YES
NO
YES
hsa-miR-17-5p
YES
YES
NO
hsa-miR-183-5p
YES
YES
YES
hsa-miR-195-5p
YES
NO
YES
hsa-miR-20a-5p
YES
YES
NO
hsa-miR-20b-5p
YES
YES
NO
hsa-miR-214-3p
YES
NO
NO
hsa-miR-296-3p
YES
YES
NO
hsa-miR-384
YES
YES
NO
hsa-miR-424-5p
YES
NO
YES
hsa-miR-497-5p
YES
NO
YES
hsa-miR-519d-3p
YES
YES
NO
hsa-miR-93-5p
YES
YES
NO
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