ctcRbase

Entry Detail

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General Information

Database ID: BRCA21541 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: BCL11B Full Name: BCL11B, BAF complex component Category: mRNA Synonyms: ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha Chromosome: chr14 Strand: - Coordinate: Start Site(bp): 99169287 End Site(bp): 99271524 Gene Summary: This gene encodes a C2H2-type zinc finger protein and is closely related to BCL11A, a gene whose translocation may be associated with B-cell malignancies. Although the specific function of this gene has not been determined, the encoded protein is known to be a transcriptional repressor, and is regulated by the NURD nucleosome remodeling and histone deacetylase complex. Four alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [provided by RefSeq, Aug 2013] External Links: Ensembl ID: ENSG00000127152 HGNC ID: HGNC:13222 Entrez Gene: 64919

Expression Profile of BCL11B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES NO YES hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-124-3p YES YES YES hsa-miR-137 YES NO YES hsa-miR-144-3p YES NO YES hsa-miR-17-5p YES YES YES hsa-miR-182-5p YES NO YES hsa-miR-186-5p YES YES YES hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-208a-3p YES NO YES hsa-miR-208b-3p YES NO YES hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-21-5p YES NO YES hsa-miR-216a-5p YES NO YES hsa-miR-216b-5p YES YES NO hsa-miR-217 YES NO YES hsa-miR-218-5p YES NO YES hsa-miR-219a-2-3p YES NO YES hsa-miR-25-3p YES YES YES hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-32-5p YES YES YES hsa-miR-33a-5p YES NO YES hsa-miR-33b-5p YES NO YES hsa-miR-342-3p YES YES NO hsa-miR-34a-5p YES NO YES hsa-miR-34c-5p YES NO YES hsa-miR-363-3p YES YES YES hsa-miR-365a-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-369-3p YES NO NO hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-375 YES YES NO hsa-miR-421 YES YES NO hsa-miR-429 YES YES NO hsa-miR-449a YES NO YES hsa-miR-449b-5p YES NO YES hsa-miR-495-3p YES YES NO hsa-miR-499a-5p YES NO YES hsa-miR-503-5p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-519d-3p YES YES YES hsa-miR-582-5p YES NO YES hsa-miR-590-5p YES NO YES hsa-miR-599 YES YES NO hsa-miR-758-3p YES YES NO hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES hsa-miR-93-5p YES YES YES Display: