Entry Detail



General Information

Database ID:BRCA23330
Cancer Type:breast cancer
Dataset:GSE41245
CTCs/CTM Isolation Method:CTC-Chip



Gene Information

ncRNA Symbol:HLA-DQA1
Full Name:major histocompatibility complex, class II, DQ alpha 1
Category:mRNA
Synonyms:CELIAC1|DQ-A1|DQA1|HLA-DQA
Chromosome:chr6
Strand:+
Coordinate:
Start Site(bp):32628179End Site(bp):32647062
Gene Summary:HLA-DQA1 belongs to the HLA class II alpha chain paralogues. The class II molecule is a heterodimer consisting of an alpha (DQA) and a beta chain (DQB), both anchored in the membrane. It plays a central role in the immune system by presenting peptides derived from extracellular proteins. Class II molecules are expressed in antigen presenting cells (APC: B Lymphocytes, dendritic cells, macrophages). The alpha chain is approximately 33-35 kDa. It is encoded by 5 exons; exon 1 encodes the leader peptide, exons 2 and 3 encode the two extracellular domains, and exon 4 encodes the transmembrane domain and the cytoplasmic tail. Within the DQ molecule both the alpha chain and the beta chain contain the polymorphisms specifying the peptide binding specificities, resulting in up to four different molecules. Typing for these polymorphisms is routinely done for bone marrow transplantation. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000196735
HGNC ID:HGNC:4942
Entrez Gene:3117



Expression Profile of HLA-DQA1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-186-5p
YES
YES
NO
Display: