ctcRbase

Entry Detail

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General Information

Database ID: BRCA26481 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: AMMECR1 Full Name: Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 Category: mRNA Synonyms: AMMERC1|MFHIEN Chromosome: chrX Strand: - Coordinate: Start Site(bp): 110194186 End Site(bp): 110440233 Gene Summary: The exact function of this gene is not known, however, submicroscopic deletion of the X chromosome including this gene, COL4A5, and FACL4 genes, result in a contiguous gene deletion syndrome, the AMME complex (Alport syndrome, mental retardation, midface hypoplasia, and elliptocytosis). Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2010] External Links: Ensembl ID: ENSG00000101935 HGNC ID: HGNC:467 Entrez Gene: 9949

Expression Profile of AMMECR1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES NO YES hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-124-3p YES YES YES hsa-miR-1252-5p YES NO NO hsa-miR-129-5p YES YES YES hsa-miR-1297 YES YES YES hsa-miR-130a-3p YES YES NO hsa-miR-130b-3p YES YES NO hsa-miR-136-5p YES YES NO hsa-miR-137 YES NO YES hsa-miR-138-5p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-143-3p YES YES YES hsa-miR-144-3p YES NO YES hsa-miR-150-5p YES YES NO hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-190a-5p YES NO YES hsa-miR-190b YES NO YES hsa-miR-191-5p YES YES YES hsa-miR-195-5p YES YES YES hsa-miR-196a-5p YES YES NO hsa-miR-196b-5p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-218-5p YES NO YES hsa-miR-221-3p YES YES YES hsa-miR-222-3p YES YES YES hsa-miR-224-5p YES YES YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-28-5p YES YES NO hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-301a-3p YES YES NO hsa-miR-301b-3p YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES NO NO hsa-miR-365a-3p YES YES YES hsa-miR-424-5p YES YES YES hsa-miR-448 YES YES YES hsa-miR-454-3p YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-506-3p YES YES NO hsa-miR-542-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-708-5p YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-9-5p YES YES YES Display: