ctcRbase

Entry Detail

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General Information

Database ID: PRAD03072 Cancer Type: prostate cancer Dataset: GSE104209 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: SLC6A6 Full Name: solute carrier family 6 member 6 Category: mRNA Synonyms: TAUT Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 14402576 End Site(bp): 14489349 Gene Summary: This gene encodes a multi-pass membrane protein that is a member of a family of sodium and chloride-ion dependent transporters. The encoded protein transports taurine and beta-alanine. There is a pseudogene for this gene on chromosome 21. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2013] External Links: Ensembl ID: ENSG00000131389 HGNC ID: HGNC:11052 Entrez Gene: 6533

Expression Profile of SLC6A6 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES NO YES hsa-miR-128-3p YES NO YES hsa-miR-1297 YES NO YES hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-133a-3p YES NO YES hsa-miR-133b YES NO YES hsa-miR-134-5p YES YES NO hsa-miR-137 YES NO YES hsa-miR-140-5p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-149-5p YES NO NO hsa-miR-182-5p YES NO YES hsa-miR-183-5p YES YES YES hsa-miR-18a-5p YES NO YES hsa-miR-18b-5p YES NO YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-216a-5p YES NO YES hsa-miR-216b-5p YES YES YES hsa-miR-218-5p YES NO YES hsa-miR-26a-5p YES NO YES hsa-miR-26b-5p YES NO YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-30a-5p YES NO YES hsa-miR-30b-5p YES NO YES hsa-miR-30c-5p YES NO YES hsa-miR-30d-5p YES NO YES hsa-miR-30e-5p YES NO YES hsa-miR-31-5p YES NO YES hsa-miR-326 YES YES NO hsa-miR-329-3p YES YES YES hsa-miR-330-5p YES YES NO hsa-miR-340-5p YES YES YES hsa-miR-362-3p YES YES YES hsa-miR-376c-3p YES YES YES hsa-miR-409-3p YES NO YES hsa-miR-410-3p YES YES NO hsa-miR-454-3p YES YES YES hsa-miR-487a-3p YES NO NO hsa-miR-488-3p YES YES NO hsa-miR-490-3p YES YES YES hsa-miR-541-3p YES NO NO hsa-miR-542-3p YES NO YES hsa-miR-654-5p YES NO NO hsa-miR-873-5p YES YES NO hsa-miR-9-5p YES YES NO hsa-miR-96-5p YES NO YES Display: