ctcRbase

Entry Detail

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General Information

Database ID: PRAD07604 Cancer Type: prostate cancer Dataset: GSE104209 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: PDZD2 Full Name: PDZ domain containing 2 Category: mRNA Synonyms: AIPC|PAPIN|PDZK3|PIN1 Chromosome: chr5 Strand: + Coordinate: Start Site(bp): 31639410 End Site(bp): 32110931 Gene Summary: The protein encoded by this gene contains six PDZ domains and shares sequence similarity with pro-interleukin-16 (pro-IL-16). Like pro-IL-16, the encoded protein localizes to the endoplasmic reticulum and is thought to be cleaved by a caspase to produce a secreted peptide containing two PDZ domains. In addition, this gene is upregulated in primary prostate tumors and may be involved in the early stages of prostate tumorigenesis. [provided by RefSeq, Dec 2015] External Links: Ensembl ID: ENSG00000133401 HGNC ID: HGNC:18486 Entrez Gene: 23037

Expression Profile of PDZD2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-137 YES NO YES hsa-miR-154-5p YES YES NO hsa-miR-21-5p YES YES YES hsa-miR-25-3p YES YES YES hsa-miR-299-3p YES YES NO hsa-miR-32-5p YES YES YES hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-410-3p YES YES NO hsa-miR-487a-3p YES NO YES hsa-miR-506-3p YES YES YES hsa-miR-590-5p YES YES YES hsa-miR-876-5p YES YES YES hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES Display: