ctcRbase

Entry Detail

---



General Information

Database ID: PRAD08273 Cancer Type: prostate cancer Dataset: GSE104209 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: KDM4A Full Name: lysine demethylase 4A Category: mRNA Synonyms: JHDM3A|JMJD2|JMJD2A|TDRD14A Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 43650158 End Site(bp): 43705515 Gene Summary: This gene is a member of the Jumonji domain 2 (JMJD2) family and encodes a protein containing a JmjN domain, a JmjC domain, a JD2H domain, two TUDOR domains, and two PHD-type zinc fingers. This nuclear protein functions as a trimethylation-specific demethylase, converting specific trimethylated histone residues to the dimethylated form, and as a transcriptional repressor. [provided by RefSeq, Apr 2009] External Links: Ensembl ID: ENSG00000066135 HGNC ID: HGNC:22978 Entrez Gene: 9682

Expression Profile of KDM4A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-10a-5p YES YES NO hsa-miR-10b-5p YES YES NO hsa-miR-137 YES YES YES hsa-miR-153-3p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-299-5p YES NO YES hsa-miR-329-3p YES YES NO hsa-miR-338-3p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-429 YES YES NO hsa-miR-495-3p YES YES YES hsa-miR-501-3p YES NO YES hsa-miR-502-3p YES NO YES hsa-miR-7-5p YES YES NO hsa-miR-760 YES NO YES hsa-miR-873-5p YES YES NO hsa-miR-874-3p YES YES YES Display: