ctcRbase

Entry Detail

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General Information

Database ID: PRAD09493 Cancer Type: prostate cancer Dataset: GSE104209 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: SLAMF6 Full Name: SLAM family member 6 Category: mRNA Synonyms: CD352|KALI|KALIb|Ly108|NTB-A|NTBA|SF2000 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 160485030 End Site(bp): 160523262 Gene Summary: The protein encoded by this gene is a type I transmembrane protein, belonging to the CD2 subfamily of the immunoglobulin superfamily. This encoded protein is expressed on Natural killer (NK), T, and B lymphocytes. It undergoes tyrosine phosphorylation and associates with the Src homology 2 domain-containing protein (SH2D1A) as well as with SH2 domain-containing phosphatases (SHPs). It functions as a coreceptor in the process of NK cell activation. It can also mediate inhibitory signals in NK cells from X-linked lymphoproliferative patients. Alternative splicing results in multiple transcript variants encoding distinct isoforms.[provided by RefSeq, May 2010] External Links: Ensembl ID: ENSG00000162739 HGNC ID: HGNC:21392 Entrez Gene: 114836

Expression Profile of SLAMF6 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-155-5p YES YES NO hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-665 YES NO YES hsa-miR-98-5p YES YES NO Display: