ctcRbase

Entry Detail

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General Information

Database ID: SKCM01087 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: HMGN5 Full Name: high mobility group nucleosome binding domain 5 Category: mRNA Synonyms: NBP-45|NSBP1 Chromosome: chrX Strand: - Coordinate: Start Site(bp): 81113701 End Site(bp): 81201942 Gene Summary: This gene encodes a nuclear protein with similarities to the high mobility group proteins, HMG14 and HMG17, which suggests that this protein may function as a nucleosomal binding and transcriptional activating protein. [provided by RefSeq, Sep 2009] External Links: Ensembl ID: ENSG00000198157 HGNC ID: HGNC:8013 Entrez Gene: 79366

Expression Profile of HMGN5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-135a-5p YES YES NO hsa-miR-135b-5p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-874-3p YES YES NO Display: