ctcRbase

Entry Detail

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General Information

Database ID: SKCM01265 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: XPNPEP3 Full Name: X-prolyl aminopeptidase 3 Category: mRNA Synonyms: APP3|ICP55|NPHPL1 Chromosome: chr22 Strand: + Coordinate: Start Site(bp): 40857077 End Site(bp): 40932815 Gene Summary: The protein encoded by this gene belongs to the family of X-pro-aminopeptidases that utilize a metal cofactor, and remove the N-terminal amino acid from peptides with a proline residue in the penultimate position. This protein has been shown to localize to the mitochondria of renal cells, and have a role in ciliary function. Mutations in this gene are associated with nephronophthisis-like nephropathy-1. Alternatively spliced transcript variants encoding different isoforms have been noted for this gene, however, expression of some of these isoforms in vivo is not known.[provided by RefSeq, Mar 2011] External Links: Ensembl ID: ENSG00000196236 HGNC ID: HGNC:28052 Entrez Gene: 63929

Expression Profile of XPNPEP3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES NO hsa-miR-150-5p YES YES NO hsa-miR-153-3p YES YES NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-31-5p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-448 YES YES NO hsa-miR-490-3p YES YES NO Display: