ctcRbase

Entry Detail

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General Information

Database ID: SKCM01405 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SMC4 Full Name: structural maintenance of chromosomes 4 Category: mRNA Synonyms: CAP-C|CAPC|SMC-4|SMC4L1 Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 160399274 End Site(bp): 160434962 Gene Summary: This gene belongs to the 'structural maintenance of chromosomes' (SMC) gene family. Members of this gene family play a role in two changes in chromosome structure during mitotic segregation of chromosomes- chromosome condensation and sister chromatid cohesion. The protein encoded by this gene is likely a subunit of the 13S condensin complex, which is involved in chromosome condensation. A pseudogene related to this gene is located on chromosome 2. [provided by RefSeq, Jun 2016] External Links: Ensembl ID: ENSG00000113810 HGNC ID: HGNC:14013 Entrez Gene: 10051

Expression Profile of SMC4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-141-3p YES YES NO hsa-miR-149-5p YES YES NO hsa-miR-182-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-199a-5p YES YES NO hsa-miR-199b-5p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-217 YES YES NO hsa-miR-219a-5p YES YES YES hsa-miR-300 YES YES NO hsa-miR-376a-3p YES YES NO hsa-miR-376b-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-653-5p YES YES NO Display: