ctcRbase

Entry Detail

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General Information

Database ID: SKCM01407 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: HMGN4 Full Name: high mobility group nucleosomal binding domain 4 Category: mRNA Synonyms: HMG17L3|NHC Chromosome: chr6 Strand: + Coordinate: Start Site(bp): 26538405 End Site(bp): 26546254 Gene Summary: The protein encoded by this gene, a member of the HMGN protein family, is thought to reduce the compactness of the chromatin fiber in nucleosomes, thereby enhancing transcription from chromatin templates. [provided by RefSeq, Mar 2013] External Links: Ensembl ID: ENSG00000182952 HGNC ID: HGNC:4989 Entrez Gene: 10473

Expression Profile of HMGN4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-204-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-296-3p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-411-5p YES YES NO hsa-miR-421 YES YES NO hsa-miR-543 YES YES NO Display: