Entry Detail



General Information

Database ID:SKCM01456
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:CBX5
Full Name:chromobox 5
Category:mRNA
Synonyms:HEL25|HP1|HP1A
Chromosome:chr12
Strand:-
Coordinate:
Start Site(bp):54230940End Site(bp):54280133
Gene Summary:This gene encodes a highly conserved nonhistone protein, which is a member of the heterochromatin protein family. The protein is enriched in the heterochromatin and associated with centromeres. The protein has a single N-terminal chromodomain which can bind to histone proteins via methylated lysine residues, and a C-terminal chromo shadow-domain (CSD) which is responsible for the homodimerization and interaction with a number of chromatin-associated nonhistone proteins. The encoded product is involved in the formation of functional kinetochore through interaction with essential kinetochore proteins. The gene has a pseudogene located on chromosome 3. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000094916
HGNC ID:HGNC:1555
Entrez Gene:23468



Expression Profile of CBX5 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-128-3p
YES
NO
YES
Display: