Entry Detail



General Information

Database ID:SKCM01521
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:C1GALT1C1
Full Name:C1GALT1 specific chaperone 1
Category:mRNA
Synonyms:C1GALT2|C38H2-L1|COSMC|HSPC067|MST143|TNPS
Chromosome:chrX
Strand:-
Coordinate:
Start Site(bp):120625793End Site(bp):120630150
Gene Summary:This gene encodes a type II transmembrane protein that is similar to the core 1 beta1,3-galactosyltransferase 1, which catalyzes the synthesis of the core-1 structure, also known as Thomsen-Friedenreich antigen, on O-linked glycans. This gene product lacks the galactosyltransferase activity itself, but instead acts as a molecular chaperone required for the folding, stability and full activity of the core 1 beta1,3-galactosyltransferase 1. Mutations in this gene have been associated with Tn syndrome. Alternatively spliced transcript variants encoding the same protein have been identified. [provided by RefSeq, Dec 2009]
External Links:
Ensembl ID:ENSG00000171155
HGNC ID:HGNC:24338
Entrez Gene:29071



Expression Profile of C1GALT1C1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-190a-5p
YES
YES
NO
hsa-miR-190b
YES
YES
NO
hsa-miR-494-3p
YES
YES
NO
Display: