ctcRbase

Entry Detail

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General Information

Database ID: SKCM01572 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: DHX36 Full Name: DEAH-box helicase 36 Category: mRNA Synonyms: DDX36|G4R1|MLEL1|RHAU Chromosome: chr3 Strand: - Coordinate: Start Site(bp): 154272546 End Site(bp): 154324497 Gene Summary: This gene is a member of the DEAH-box family of RNA-dependent NTPases which are named after the conserved amino acid sequence Asp-Glu-Ala-His in motif II. The protein encoded by this gene has been shown to enhance the deadenylation and decay of mRNAs with 3'-UTR AU-rich elements (ARE-mRNA). The protein has also been shown to resolve into single strands the highly stable tetramolecular DNA configuration (G4) that can form spontaneously in guanine-rich regions of DNA. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000174953 HGNC ID: HGNC:14410 Entrez Gene: 170506

Expression Profile of DHX36 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES NO YES hsa-miR-1297 YES YES NO hsa-miR-137 YES YES NO hsa-miR-150-5p YES YES NO hsa-miR-182-5p YES NO YES hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-378a-3p YES YES NO hsa-miR-383-5p YES YES YES hsa-miR-410-3p YES YES NO hsa-miR-422a YES YES NO hsa-miR-429 YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-599 YES YES NO hsa-miR-96-5p YES YES YES Display: