Entry Detail



General Information

Database ID:SKCM01758
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:FEN1
Full Name:flap structure-specific endonuclease 1
Category:mRNA
Synonyms:FEN-1|MF1|RAD2
Chromosome:chr11
Strand:+
Coordinate:
Start Site(bp):61792637End Site(bp):61797244
Gene Summary:The protein encoded by this gene removes 5' overhanging flaps in DNA repair and processes the 5' ends of Okazaki fragments in lagging strand DNA synthesis. Direct physical interaction between this protein and AP endonuclease 1 during long-patch base excision repair provides coordinated loading of the proteins onto the substrate, thus passing the substrate from one enzyme to another. The protein is a member of the XPG/RAD2 endonuclease family and is one of ten proteins essential for cell-free DNA replication. DNA secondary structure can inhibit flap processing at certain trinucleotide repeats in a length-dependent manner by concealing the 5' end of the flap that is necessary for both binding and cleavage by the protein encoded by this gene. Therefore, secondary structure can deter the protective function of this protein, leading to site-specific trinucleotide expansions. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000168496
HGNC ID:HGNC:3650
Entrez Gene:2237



Expression Profile of FEN1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-1297
YES
YES
NO
hsa-miR-140-5p
YES
YES
YES
hsa-miR-199a-5p
YES
YES
NO
hsa-miR-199b-5p
YES
YES
NO
hsa-miR-26a-5p
YES
YES
NO
hsa-miR-26b-5p
YES
YES
NO
Display: