ctcRbase

Entry Detail

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General Information

Database ID: SKCM01890 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CSTF1 Full Name: cleavage stimulation factor subunit 1 Category: mRNA Synonyms: CstF-50|CstFp50 Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 56392371 End Site(bp): 56406369 Gene Summary: This gene encodes one of three subunits which combine to form cleavage stimulation factor (CSTF). CSTF is involved in the polyadenylation and 3'end cleavage of pre-mRNAs. Similar to mammalian G protein beta subunits, this protein contains transducin-like repeats. Several transcript variants with different 5' UTR, but encoding the same protein, have been found for this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000101138 HGNC ID: HGNC:2483 Entrez Gene: 1477

Expression Profile of CSTF1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-192-5p YES YES NO hsa-miR-193a-3p YES YES NO hsa-miR-193b-3p YES YES NO hsa-miR-215-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-361-5p YES YES YES hsa-miR-365a-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-486-5p YES YES NO hsa-miR-653-5p YES YES NO Display: