ctcRbase

Entry Detail

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General Information

Database ID: SKCM01983 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TIAL1 Full Name: TIA1 cytotoxic granule associated RNA binding protein like 1 Category: mRNA Synonyms: TCBP|TIAR Chromosome: chr10 Strand: - Coordinate: Start Site(bp): 119571802 End Site(bp): 119597029 Gene Summary: The protein encoded by this gene is a member of a family of RNA-binding proteins, has three RNA recognition motifs (RRMs), and binds adenine and uridine-rich elements in mRNA and pre-mRNAs of a wide range of genes. It regulates various activities including translational control, splicing and apoptosis. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. The different isoforms have been show to function differently with respect to post-transcriptional silencing. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000151923 HGNC ID: HGNC:11804 Entrez Gene: 7073

Expression Profile of TIAL1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-122-5p YES YES NO hsa-miR-128-3p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-1297 YES YES NO hsa-miR-137 YES YES NO hsa-miR-141-3p YES YES YES hsa-miR-155-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-204-5p YES YES YES hsa-miR-205-5p YES NO YES hsa-miR-211-5p YES YES YES hsa-miR-217 YES YES YES hsa-miR-218-5p YES YES NO hsa-miR-219a-2-3p YES NO YES hsa-miR-219a-5p YES YES NO hsa-miR-223-3p YES NO YES hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-300 YES NO YES hsa-miR-330-3p YES NO YES hsa-miR-338-3p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-381-3p YES NO YES hsa-miR-384 YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-429 YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-653-5p YES YES NO hsa-miR-876-5p YES YES NO Display: