Entry Detail



General Information

Database ID:SKCM01985
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:PNPT1
Full Name:polyribonucleotide nucleotidyltransferase 1
Category:mRNA
Synonyms:COXPD13|DFNB70|OLD35|PNPASE|old-35
Chromosome:chr2
Strand:-
Coordinate:
Start Site(bp):55634265End Site(bp):55693910
Gene Summary:The protein encoded by this gene belongs to the evolutionary conserved polynucleotide phosphorylase family comprised of phosphate dependent 3'-to-5' exoribonucleases implicated in RNA processing and degradation. This enzyme is predominantly localized in the mitochondrial intermembrane space and is involved in import of RNA to mitochondria. Mutations in this gene have been associated with combined oxidative phosphorylation deficiency-13 and autosomal recessive nonsyndromic deafness-70. Related pseudogenes are found on chromosomes 3 and 7. [provided by RefSeq, Dec 2012]
External Links:
Ensembl ID:ENSG00000138035
HGNC ID:HGNC:23166
Entrez Gene:87178



Expression Profile of PNPT1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-145-5p
YES
YES
YES
hsa-miR-183-5p
YES
YES
YES
hsa-miR-361-5p
YES
YES
NO
hsa-miR-374a-5p
YES
YES
YES
hsa-miR-374b-5p
YES
YES
YES
hsa-miR-382-5p
YES
YES
NO
hsa-miR-451a
YES
YES
NO
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