ctcRbase

Entry Detail

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General Information

Database ID: SKCM02027 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SEC22C Full Name: SEC22 homolog C, vesicle trafficking protein Category: mRNA Synonyms: SEC22L3 Chromosome: chr3 Strand: - Coordinate: Start Site(bp): 42547969 End Site(bp): 42601080 Gene Summary: This gene encodes a member of the SEC22 family of vesicle trafficking proteins. The encoded protein is localized to the endoplasmic reticulum and may play a role in the early stages of ER-Golgi protein trafficking. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jan 2011] External Links: Ensembl ID: ENSG00000093183 HGNC ID: HGNC:16828 Entrez Gene: 9117

Expression Profile of SEC22C Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-122-5p YES YES NO hsa-miR-1271-5p YES YES NO hsa-miR-1297 YES YES NO hsa-miR-140-5p YES YES YES hsa-miR-145-5p YES YES NO hsa-miR-155-5p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-874-3p YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-96-5p YES YES NO Display: