ctcRbase

Entry Detail

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General Information

Database ID: SKCM02149 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TNC Full Name: tenascin C Category: mRNA Synonyms: 150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C Chromosome: chr9 Strand: - Coordinate: Start Site(bp): 115019578 End Site(bp): 115118257 Gene Summary: This gene encodes an extracellular matrix protein with a spatially and temporally restricted tissue distribution. This protein is homohexameric with disulfide-linked subunits, and contains multiple EGF-like and fibronectin type-III domains. It is implicated in guidance of migrating neurons as well as axons during development, synaptic plasticity, and neuronal regeneration. [provided by RefSeq, Jul 2011] External Links: Ensembl ID: ENSG00000041982 HGNC ID: HGNC:5318 Entrez Gene: 3371

Expression Profile of TNC Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-135a-5p YES YES NO hsa-miR-135b-5p YES YES NO hsa-miR-137 YES YES NO hsa-miR-138-5p YES YES NO hsa-miR-144-3p YES YES YES hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-218-5p YES YES YES hsa-miR-300 YES YES NO hsa-miR-326 YES YES YES hsa-miR-330-5p YES YES YES hsa-miR-365a-3p YES YES YES hsa-miR-371a-5p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-486-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES YES hsa-miR-668-3p YES NO YES hsa-miR-9-5p YES YES YES Display: