ctcRbase

Entry Detail

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General Information

Database ID: SKCM02261 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SGCB Full Name: sarcoglycan beta Category: mRNA Synonyms: A3b|LGMD2E|LGMDR4|SGC Chromosome: chr4 Strand: - Coordinate: Start Site(bp): 52020706 End Site(bp): 52038482 Gene Summary: This gene encodes a member of the sarcoglycan family. Sarcoglycans are transmembrane components in the dystrophin-glycoprotein complex which help stabilize the muscle fiber membranes and link the muscle cytoskeleton to the extracellular matrix. Mutations in this gene have been associated with limb-girdle muscular dystrophy.[provided by RefSeq, Oct 2008] External Links: Ensembl ID: ENSG00000163069 HGNC ID: HGNC:10806 Entrez Gene: 6443

Expression Profile of SGCB Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES NO hsa-miR-196a-5p YES YES NO hsa-miR-196b-5p YES YES NO hsa-miR-199a-5p YES YES NO hsa-miR-199b-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-224-5p YES NO NO hsa-miR-24-3p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-346 YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO Display: