ctcRbase

Entry Detail

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General Information

Database ID: SKCM02309 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CSNK1E Full Name: casein kinase 1 epsilon Category: mRNA Synonyms: CKIe|CKIepsilon|HCKIE Chromosome: chr22 Strand: - Coordinate: Start Site(bp): 38290691 End Site(bp): 38318084 Gene Summary: The protein encoded by this gene is a serine/threonine protein kinase and a member of the casein kinase I protein family, whose members have been implicated in the control of cytoplasmic and nuclear processes, including DNA replication and repair. The encoded protein is found in the cytoplasm as a monomer and can phosphorylate a variety of proteins, including itself. This protein has been shown to phosphorylate period, a circadian rhythm protein. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Feb 2014] External Links: Ensembl ID: ENSG00000213923 HGNC ID: HGNC:2453 Entrez Gene: 1454

Expression Profile of CSNK1E Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-134-5p YES YES NO hsa-miR-140-5p YES YES NO hsa-miR-141-3p YES YES YES hsa-miR-182-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-210-3p YES YES NO hsa-miR-218-5p YES NO YES hsa-miR-22-3p YES YES NO hsa-miR-31-5p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-362-3p YES NO NO hsa-miR-371a-5p YES YES NO hsa-miR-375 YES YES NO hsa-miR-411-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-541-3p YES NO NO hsa-miR-654-5p YES NO NO hsa-miR-873-5p YES YES NO hsa-miR-98-5p YES YES NO Display: