ctcRbase

Entry Detail

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General Information

Database ID: SKCM02483 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: AMD1 Full Name: adenosylmethionine decarboxylase 1 Category: mRNA Synonyms: ADOMETDC|AMD|SAMDC Chromosome: chr6 Strand: + Coordinate: Start Site(bp): 110874770 End Site(bp): 110895713 Gene Summary: This gene encodes an important intermediate enzyme in polyamine biosynthesis. The polyamines spermine, spermidine, and putrescine are low-molecular-weight aliphatic amines essential for cellular proliferation and tumor promotion. Multiple alternatively spliced transcript variants have been identified. Pseudogenes of this gene are found on chromosomes 5, 6, 10, X and Y. [provided by RefSeq, Dec 2013] External Links: Ensembl ID: ENSG00000123505 HGNC ID: HGNC:457 Entrez Gene: 262

Expression Profile of AMD1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1224-5p YES NO YES hsa-miR-128-3p YES YES YES hsa-miR-129-5p YES YES YES hsa-miR-1323 YES NO NO hsa-miR-132-3p YES YES YES hsa-miR-133a-3p YES YES YES hsa-miR-133b YES YES YES hsa-miR-137 YES YES YES hsa-miR-153-3p YES YES NO hsa-miR-155-5p YES YES NO hsa-miR-183-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-212-3p YES YES YES hsa-miR-216a-5p YES YES YES hsa-miR-216b-5p YES YES NO hsa-miR-217 YES YES YES hsa-miR-224-5p YES YES NO hsa-miR-27a-3p YES NO NO hsa-miR-27b-3p YES NO NO hsa-miR-326 YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-340-5p YES YES YES hsa-miR-369-3p YES NO YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-448 YES YES NO hsa-miR-450a-5p YES NO YES hsa-miR-487a-3p YES NO YES hsa-miR-488-3p YES YES NO hsa-miR-491-5p YES YES YES hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES NO NO hsa-miR-496 YES YES NO hsa-miR-505-3p YES YES NO hsa-miR-543 YES NO YES hsa-miR-548o-3p YES NO NO hsa-miR-668-3p YES NO YES Display: