ctcRbase

Entry Detail

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General Information

Database ID: SKCM02512 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SH3KBP1 Full Name: SH3 domain containing kinase binding protein 1 Category: mRNA Synonyms: CD2BP3|CIN85|GIG10|HSB-1|HSB1|MIG18 Chromosome: chrX Strand: - Coordinate: Start Site(bp): 19533975 End Site(bp): 19887601 Gene Summary: This gene encodes an adapter protein that contains one or more N-terminal Src homology domains, a proline rich region and a C-terminal coiled-coil domain. The encoded protein facilitates protein-protein interactions and has been implicated in numerous cellular processes including apoptosis, cytoskeletal rearrangement, cell adhesion and in the regulation of clathrin-dependent endocytosis. Alternate splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jul 2017] External Links: Ensembl ID: ENSG00000147010 HGNC ID: HGNC:13867 Entrez Gene: 30011

Expression Profile of SH3KBP1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES YES hsa-miR-129-5p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-153-3p YES NO YES hsa-miR-182-5p YES NO YES hsa-miR-18a-5p YES YES YES hsa-miR-18b-5p YES YES YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-218-5p YES YES YES hsa-miR-224-5p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-320a YES YES YES hsa-miR-320b YES YES YES hsa-miR-320c YES YES YES hsa-miR-320d YES YES YES hsa-miR-33a-5p YES YES YES hsa-miR-33b-5p YES YES YES hsa-miR-340-5p YES YES YES hsa-miR-448 YES YES YES hsa-miR-96-5p YES YES YES Display: