Entry Detail



General Information

Database ID:SKCM02522
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:PABPC4
Full Name:poly(A) binding protein cytoplasmic 4
Category:mRNA
Synonyms:APP-1|APP1|PABP4|iPABP
Chromosome:chr1
Strand:-
Coordinate:
Start Site(bp):39560816End Site(bp):39576790
Gene Summary:Poly(A)-binding proteins (PABPs) bind to the poly(A) tail present at the 3-prime ends of most eukaryotic mRNAs. PABPC4 or IPABP (inducible PABP) was isolated as an activation-induced T-cell mRNA encoding a protein. Activation of T cells increased PABPC4 mRNA levels in T cells approximately 5-fold. PABPC4 contains 4 RNA-binding domains and proline-rich C terminus. PABPC4 is localized primarily to the cytoplasm. It is suggested that PABPC4 might be necessary for regulation of stability of labile mRNA species in activated T cells. PABPC4 was also identified as an antigen, APP1 (activated-platelet protein-1), expressed on thrombin-activated rabbit platelets. PABPC4 may also be involved in the regulation of protein translation in platelets and megakaryocytes or may participate in the binding or stabilization of polyadenylates in platelet dense granules. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2008]
External Links:
Ensembl ID:ENSG00000090621
HGNC ID:HGNC:8557
Entrez Gene:8761



Expression Profile of PABPC4 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-141-3p
YES
YES
NO
hsa-miR-192-5p
YES
YES
NO
hsa-miR-200a-3p
YES
YES
NO
hsa-miR-215-5p
YES
YES
NO
hsa-miR-300
YES
YES
NO
hsa-miR-381-3p
YES
YES
NO
hsa-miR-499a-5p
YES
YES
NO
hsa-miR-625-5p
YES
NO
NO
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