ctcRbase

Entry Detail

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General Information

Database ID: SKCM02539 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TFAP2C Full Name: transcription factor AP-2 gamma Category: mRNA Synonyms: AP2-GAMMA|ERF1|TFAP2G|hAP-2g Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 56629302 End Site(bp): 56639283 Gene Summary: The protein encoded by this gene is a sequence-specific DNA-binding transcription factor involved in the activation of several developmental genes. The encoded protein can act as either a homodimer or heterodimer with other family members and is induced during retinoic acid-mediated differentiation. It plays a role in the development of the eyes, face, body wall, limbs, and neural tube. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000087510 HGNC ID: HGNC:11744 Entrez Gene: 7022

Expression Profile of TFAP2C Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-10a-5p YES YES YES hsa-miR-10b-5p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-1297 YES NO YES hsa-miR-136-5p YES YES NO hsa-miR-137 YES YES YES hsa-miR-1-3p YES YES NO hsa-miR-141-3p YES YES YES hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-206 YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-26a-5p YES NO YES hsa-miR-26b-5p YES NO YES hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-320a YES NO YES hsa-miR-320b YES NO YES hsa-miR-320c YES NO YES hsa-miR-320d YES NO YES hsa-miR-329-3p YES YES NO hsa-miR-338-3p YES YES NO hsa-miR-339-5p YES YES NO hsa-miR-362-3p YES NO NO hsa-miR-424-5p YES YES NO hsa-miR-486-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-497-5p YES YES NO hsa-miR-613 YES YES NO hsa-miR-873-5p YES YES NO Display: