ctcRbase

Entry Detail

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General Information

Database ID: SKCM02571 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: AP1S1 Full Name: adaptor related protein complex 1 subunit sigma 1 Category: mRNA Synonyms: AP19|CLAPS1|EKV3|MEDNIK|SIGMA1A Chromosome: chr7 Strand: + Coordinate: Start Site(bp): 101154397 End Site(bp): 101161596 Gene Summary: The protein encoded by this gene is part of the clathrin coat assembly complex which links clathrin to receptors in coated vesicles. These vesicles are involved in endocytosis and Golgi processing. This protein, as well as beta-prime-adaptin, gamma-adaptin, and the medium (mu) chain AP47, form the AP-1 assembly protein complex located at the Golgi vesicle. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000106367 HGNC ID: HGNC:559 Entrez Gene: 1174

Expression Profile of AP1S1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-1-3p YES YES YES hsa-miR-154-5p YES YES NO hsa-miR-204-5p YES YES YES hsa-miR-206 YES YES YES hsa-miR-211-5p YES YES YES hsa-miR-22-3p YES YES YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-31-5p YES YES YES hsa-miR-488-3p YES YES NO hsa-miR-490-3p YES NO YES hsa-miR-582-5p YES NO YES hsa-miR-613 YES YES YES hsa-miR-874-3p YES YES NO hsa-miR-98-5p YES YES YES Display: