ctcRbase

Entry Detail

---



General Information

Database ID: SKCM02619 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: GATAD1 Full Name: GATA zinc finger domain containing 1 Category: mRNA Synonyms: CMD2B|ODAG|RG083M05.2 Chromosome: chr7 Strand: + Coordinate: Start Site(bp): 92447453 End Site(bp): 92458836 Gene Summary: The protein encoded by this gene contains a zinc finger at the N-terminus, and is thought to bind to a histone modification site that regulates gene expression. Mutations in this gene have been associated with autosomal recessive dilated cardiomyopathy. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jun 2012] External Links: Ensembl ID: ENSG00000157259 HGNC ID: HGNC:29941 Entrez Gene: 57798

Expression Profile of GATAD1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-1271-5p YES YES NO hsa-miR-143-3p YES YES NO hsa-miR-145-5p YES YES NO hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-150-5p YES YES NO hsa-miR-17-5p YES YES NO hsa-miR-188-5p YES NO YES hsa-miR-204-5p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-328-3p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-375 YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-93-5p YES YES NO hsa-miR-96-5p YES YES NO Display: