ctcRbase

Entry Detail

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General Information

Database ID: SKCM02642 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SPAG9 Full Name: sperm associated antigen 9 Category: mRNA Synonyms: CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 Chromosome: chr17 Strand: - Coordinate: Start Site(bp): 50962174 End Site(bp): 51120865 Gene Summary: This gene encodes a member of the cancer testis antigen gene family. The encoded protein functions as a scaffold protein that structurally organizes mitogen-activated protein kinases and mediates c-Jun-terminal kinase signaling. This protein also binds to kinesin-1 and may be involved in microtubule-based membrane transport. This protein may play a role in tumor growth and development. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Oct 2011] External Links: Ensembl ID: ENSG00000008294 HGNC ID: HGNC:14524 Entrez Gene: 9043

Expression Profile of SPAG9 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-10a-5p NO YES YES hsa-miR-10b-5p NO YES YES hsa-miR-141-3p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-200a-3p YES YES YES hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-342-3p YES YES NO hsa-miR-375 YES NO YES hsa-miR-376a-3p NO YES YES hsa-miR-376b-3p NO YES YES hsa-miR-377-3p YES YES NO hsa-miR-542-3p YES YES YES hsa-miR-543 YES YES NO hsa-miR-582-5p YES NO YES hsa-miR-9-5p NO YES YES Display: