ctcRbase

Entry Detail

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General Information

Database ID: SKCM02679 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: LUC7L2 Full Name: LUC7 like 2, pre-mRNA splicing factor Category: mRNA Synonyms: CGI-59|CGI-74|LUC7B2 Chromosome: chr7 Strand: + Coordinate: Start Site(bp): 139340359 End Site(bp): 139423457 Gene Summary: This gene encodes a protein that contains a C2H2-type zinc finger, coiled-coil region and arginine, serine-rich (RS) domain. A similar protein in mouse interacts with sodium channel modifier 1, and the encoded protein may be involved in the recognition of non-consensus splice donor sites in association with the U1 snRNP spliceosomal subunit. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Sep 2011] External Links: Ensembl ID: ENSG00000146963 HGNC ID: HGNC:21608 Entrez Gene: 51631

Expression Profile of LUC7L2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-137 YES YES YES hsa-miR-155-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-219a-5p YES YES YES hsa-miR-302a-3p YES YES YES hsa-miR-302b-3p YES YES YES hsa-miR-302c-3p YES YES YES hsa-miR-302d-3p YES YES YES hsa-miR-302e YES YES YES hsa-miR-320a YES YES YES hsa-miR-320b YES YES YES hsa-miR-320c YES YES YES hsa-miR-320d YES YES YES hsa-miR-365a-3p YES YES YES hsa-miR-372-3p YES YES YES hsa-miR-373-3p YES YES YES hsa-miR-375 YES NO YES hsa-miR-383-5p YES YES NO hsa-miR-410-3p YES YES YES hsa-miR-421 YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-506-3p YES YES YES hsa-miR-520a-3p YES YES YES hsa-miR-520b YES YES YES hsa-miR-520c-3p YES YES YES hsa-miR-520d-3p YES YES YES hsa-miR-520e YES YES YES hsa-miR-520f-3p YES NO YES hsa-miR-542-3p YES YES NO hsa-miR-582-5p YES NO YES hsa-miR-653-5p YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-9-5p YES YES YES Display: