ctcRbase

Entry Detail

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General Information

Database ID: SKCM02721 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: MSI2 Full Name: musashi RNA binding protein 2 Category: mRNA Synonyms: MSI2H Chromosome: chr17 Strand: + Coordinate: Start Site(bp): 57255851 End Site(bp): 57684685 Gene Summary: This gene encodes an RNA-binding protein that is a member of the Musashi protein family. The encoded protein is transcriptional regulator that targets genes involved in development and cell cycle regulation. Mutations in this gene are associated with poor prognosis in certain types of cancers. This gene has also been shown to be rearranged in certain cancer cells. [provided by RefSeq, Apr 2016] External Links: Ensembl ID: ENSG00000153944 HGNC ID: HGNC:18585 Entrez Gene: 124540

Expression Profile of MSI2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1321 YES NO NO hsa-miR-1323 YES NO NO hsa-miR-134-5p YES YES NO hsa-miR-138-5p YES YES NO hsa-miR-143-3p YES NO YES hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-378a-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-422a YES YES NO hsa-miR-431-5p YES YES YES hsa-miR-485-5p YES YES YES hsa-miR-495-3p YES NO NO hsa-miR-548o-3p YES NO NO Display: