ctcRbase

Entry Detail

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General Information

Database ID: SKCM02746 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: NSD3 Full Name: nuclear receptor binding SET domain protein 3 Category: mRNA Synonyms: KMT3F|KMT3G|WHISTLE|WHSC1L1|pp14328 Chromosome: chr8 Strand: - Coordinate: Start Site(bp): 38269697 End Site(bp): 38382272 Gene Summary: This gene is related to the Wolf-Hirschhorn syndrome candidate-1 gene and encodes a protein with PWWP (proline-tryptophan-tryptophan-proline) domains. This protein methylates histone H3 at lysine residues 4 and 27, which represses gene transcription. Two alternatively spliced variants have been described. [provided by RefSeq, May 2015] External Links: Ensembl ID: ENSG00000147548 HGNC ID: HGNC:12767 Entrez Gene: 54904

Expression Profile of NSD3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-132-3p YES YES YES hsa-miR-135a-5p YES YES NO hsa-miR-135b-5p YES YES NO hsa-miR-138-5p YES YES YES hsa-miR-1-3p YES YES NO hsa-miR-155-5p YES YES NO hsa-miR-182-5p YES YES YES hsa-miR-183-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-205-5p YES YES YES hsa-miR-206 YES YES NO hsa-miR-210-3p YES YES NO hsa-miR-212-3p YES YES YES hsa-miR-21-5p YES YES NO hsa-miR-216a-5p YES NO YES hsa-miR-216b-5p YES YES YES hsa-miR-219a-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-31-5p YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-330-3p YES NO YES hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES NO NO hsa-miR-375 YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-383-5p YES YES NO hsa-miR-384 YES YES NO hsa-miR-452-5p YES NO YES hsa-miR-454-3p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-582-5p YES NO YES hsa-miR-590-5p YES YES NO hsa-miR-613 YES YES NO hsa-miR-653-5p YES YES NO hsa-miR-655-3p YES NO YES hsa-miR-758-3p YES YES NO Display: