ctcRbase

Entry Detail

General Information

Database ID:	SKCM02778
Cancer Type:	melanoma
Dataset:	GSE38495
CTCs/CTM Isolation Method:	immunomagnetic purification

Gene Information

ncRNA Symbol:

DIAPH1

Full Name:

diaphanous related formin 1

Category:

mRNA

Synonyms:

Chromosome:

chr5

Strand:

Coordinate:

Start Site(bp):

141515016

End Site(bp):

141619055

Gene Summary:

This gene is a homolog of the Drosophila diaphanous gene, and has been linked to autosomal dominant, fully penetrant, nonsyndromic sensorineural progressive low-frequency hearing loss. Actin polymerization involves proteins known to interact with diaphanous protein in Drosophila and mouse. It has therefore been speculated that this gene may have a role in the regulation of actin polymerization in hair cells of the inner ear. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

External Links:

Ensembl ID:	ENSG00000131504
HGNC ID:	HGNC:2876
Entrez Gene:	1729

Expression Profile of DIAPH1 Gene

Regulatory Relationship

mRNA targets:

miRNA targets:

miRNA Name	PITA	miRanda	RNAhybrid
hsa-miR-101-3p	YES	YES	NO
hsa-miR-124-3p	YES	NO	YES
hsa-miR-132-3p	YES	NO	YES
hsa-miR-143-3p	YES	YES	NO
hsa-miR-145-5p	YES	YES	NO
hsa-miR-15a-5p	YES	YES	YES
hsa-miR-15b-5p	YES	YES	YES
hsa-miR-16-5p	YES	YES	YES
hsa-miR-192-5p	YES	NO	YES
hsa-miR-194-5p	YES	YES	NO
hsa-miR-195-5p	YES	YES	YES
hsa-miR-212-3p	YES	NO	YES
hsa-miR-214-3p	YES	YES	NO
hsa-miR-215-5p	YES	NO	YES
hsa-miR-24-3p	YES	YES	YES
hsa-miR-27a-3p	YES	YES	NO
hsa-miR-27b-3p	YES	YES	NO
hsa-miR-300	YES	YES	NO
hsa-miR-320a	YES	YES	NO
hsa-miR-320b	YES	YES	NO
hsa-miR-320c	YES	YES	NO
hsa-miR-320d	YES	YES	NO
hsa-miR-342-3p	YES	YES	NO
hsa-miR-381-3p	YES	YES	NO
hsa-miR-384	YES	YES	NO
hsa-miR-424-5p	YES	YES	YES
hsa-miR-488-3p	YES	YES	NO
hsa-miR-489-3p	YES	NO	YES
hsa-miR-495-3p	YES	YES	NO
hsa-miR-497-5p	YES	YES	YES
hsa-miR-506-3p	YES	YES	NO
hsa-miR-625-5p	YES	NO	NO
hsa-miR-665	YES	NO	YES
hsa-miR-9-5p	YES	YES	YES

Display: