ctcRbase

Entry Detail

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General Information

Database ID: SKCM02788 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: DEPDC1 Full Name: DEP domain containing 1 Category: mRNA Synonyms: DEP.8|DEPDC1-V2|DEPDC1A|SDP35 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 68474152 End Site(bp): 68497221 Gene Summary: NA External Links: Ensembl ID: ENSG00000024526 HGNC ID: HGNC:22949 Entrez Gene: 55635

Expression Profile of DEPDC1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES YES hsa-miR-1297 YES YES YES hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-132-3p YES YES NO hsa-miR-135a-5p YES YES YES hsa-miR-135b-5p YES YES YES hsa-miR-142-3p YES YES NO hsa-miR-144-3p YES YES NO hsa-miR-182-5p YES NO YES hsa-miR-186-5p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-376a-3p YES YES NO hsa-miR-376b-3p YES YES NO hsa-miR-410-3p YES NO YES hsa-miR-433-3p YES YES NO hsa-miR-454-3p YES YES YES hsa-miR-455-5p YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-874-3p YES YES NO hsa-miR-96-5p YES YES YES Display: