ctcRbase

Entry Detail

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General Information

Database ID: SKCM02808 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SNRNP40 Full Name: small nuclear ribonucleoprotein U5 subunit 40 Category: mRNA Synonyms: 40K|HPRP8BP|PRP8BP|PRPF8BP|SPF38|WDR57 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 31259568 End Site(bp): 31296782 Gene Summary: This gene encodes a component of the U5 small nuclear ribonucleoprotein (snRNP) particle. The U5 snRNP is part of the spliceosome, a multiprotein complex that catalyzes the removal of introns from pre-messenger RNAs. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000060688 HGNC ID: HGNC:30857 Entrez Gene: 9410

Expression Profile of SNRNP40 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-140-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-655-3p YES NO YES hsa-miR-873-5p YES YES NO Display: