ctcRbase

Entry Detail

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General Information

Database ID: SKCM02835 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: RAP2B Full Name: RAP2B, member of RAS oncogene family Category: mRNA Synonyms: - Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 153162270 End Site(bp): 153170620 Gene Summary: This intronless gene belongs to a family of RAS-related genes. The proteins encoded by these genes share approximately 50% amino acid identity with the classical RAS proteins and have numerous structural features in common. The most striking difference between the RAP and RAS proteins resides in their 61st amino acid: glutamine in RAS is replaced by threonine in RAP proteins. Evidence suggests that this protein may be polyisoprenylated and palmitoylated. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000181467 HGNC ID: HGNC:9862 Entrez Gene: 5912

Expression Profile of RAP2B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES NO YES hsa-miR-124-3p YES NO YES hsa-miR-1271-5p YES NO YES hsa-miR-132-3p YES YES YES hsa-miR-140-5p YES NO YES hsa-miR-144-3p YES YES NO hsa-miR-147b YES NO YES hsa-miR-149-5p YES NO YES hsa-miR-153-3p YES YES YES hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-194-5p YES NO YES hsa-miR-19a-3p YES NO YES hsa-miR-19b-3p YES NO YES hsa-miR-205-5p YES YES YES hsa-miR-210-3p YES NO YES hsa-miR-212-3p YES YES YES hsa-miR-216a-5p YES NO YES hsa-miR-216b-5p YES NO YES hsa-miR-22-3p YES NO YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-27a-3p YES NO YES hsa-miR-27b-3p YES NO YES hsa-miR-300 YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-31-5p YES YES YES hsa-miR-329-3p YES NO NO hsa-miR-330-3p YES NO YES hsa-miR-362-3p YES NO NO hsa-miR-370-3p YES NO YES hsa-miR-371a-5p YES NO YES hsa-miR-381-3p YES YES NO hsa-miR-411-5p YES YES NO hsa-miR-448 YES NO YES hsa-miR-488-3p YES YES NO hsa-miR-543 YES NO YES hsa-miR-874-3p YES NO YES hsa-miR-96-5p YES NO YES Display: