Entry Detail



General Information

Database ID:SKCM02836
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:SPTAN1
Full Name:spectrin alpha, non-erythrocytic 1
Category:mRNA
Synonyms:EIEE5|NEAS|SPTA2
Chromosome:chr9
Strand:+
Coordinate:
Start Site(bp):128552558End Site(bp):128633662
Gene Summary:Spectrins are a family of filamentous cytoskeletal proteins that function as essential scaffold proteins that stabilize the plasma membrane and organize intracellular organelles. Spectrins are composed of alpha and beta dimers that associate to form tetramers linked in a head-to-head arrangement. This gene encodes an alpha spectrin that is specifically expressed in nonerythrocytic cells. The encoded protein has been implicated in other cellular functions including DNA repair and cell cycle regulation. Mutations in this gene are the cause of early infantile epileptic encephalopathy-5. Alternate splicing results in multiple transcript variants.[provided by RefSeq, Sep 2010]
External Links:
Ensembl ID:ENSG00000197694
HGNC ID:HGNC:11273
Entrez Gene:6709



Expression Profile of SPTAN1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-128-3p
YES
YES
NO
hsa-miR-134-5p
YES
YES
NO
hsa-miR-185-5p
YES
YES
NO
hsa-miR-29a-3p
YES
YES
YES
hsa-miR-29b-3p
YES
YES
YES
hsa-miR-29c-3p
YES
YES
YES
hsa-miR-758-3p
YES
YES
NO
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