ctcRbase

Entry Detail

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General Information

Database ID: SKCM02858 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CLK3 Full Name: CDC like kinase 3 Category: mRNA Synonyms: PHCLK3|PHCLK3/152 Chromosome: chr15 Strand: + Coordinate: Start Site(bp): 74598500 End Site(bp): 74645414 Gene Summary: This gene encodes a protein belonging to the serine/threonine type protein kinase family. This protein is a nuclear dual-specificity kinase that regulates the intranuclear distribution of the serine/arginine-rich (SR) family of splicing factors. Two transcript variants encoding different isoforms have been found for this gene. Related pseudogenes are located on chromosomes 1 and 9. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000179335 HGNC ID: HGNC:2071 Entrez Gene: 1198

Expression Profile of CLK3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-138-5p YES NO YES hsa-miR-141-3p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-218-5p YES YES YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-25-3p YES YES YES hsa-miR-32-5p YES YES YES hsa-miR-340-5p YES YES NO hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-455-5p YES NO YES hsa-miR-494-3p YES YES NO hsa-miR-760 YES NO YES hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES Display: