ctcRbase

Entry Detail

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General Information

Database ID: SKCM02882 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ATP2C1 Full Name: ATPase secretory pathway Ca2+ transporting 1 Category: mRNA Synonyms: ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 130850595 End Site(bp): 131016712 Gene Summary: The protein encoded by this gene belongs to the family of P-type cation transport ATPases. This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium ions. Defects in this gene cause Hailey-Hailey disease, an autosomal dominant disorder. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Aug 2011] External Links: Ensembl ID: ENSG00000017260 HGNC ID: HGNC:13211 Entrez Gene: 27032

Expression Profile of ATP2C1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES YES hsa-miR-1297 YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-142-5p YES NO YES hsa-miR-144-3p YES YES YES hsa-miR-153-3p YES YES YES hsa-miR-183-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-196a-5p YES YES NO hsa-miR-196b-5p YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-212-3p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-302a-3p YES NO YES hsa-miR-302b-3p YES NO YES hsa-miR-302c-3p YES NO YES hsa-miR-302d-3p YES NO YES hsa-miR-302e YES NO YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-365a-3p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-372-3p YES NO YES hsa-miR-373-3p YES NO YES hsa-miR-384 YES YES YES hsa-miR-411-5p YES YES NO hsa-miR-448 YES YES YES hsa-miR-483-3p YES NO YES hsa-miR-495-3p YES YES NO hsa-miR-520a-3p YES NO YES hsa-miR-520b YES NO YES hsa-miR-520c-3p YES NO YES hsa-miR-520d-3p YES NO YES hsa-miR-520e YES NO YES hsa-miR-532-5p YES NO YES hsa-miR-543 YES YES NO hsa-miR-599 YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-874-3p YES NO YES hsa-miR-876-5p YES YES NO Display: