ctcRbase

Entry Detail

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General Information

Database ID: SKCM02956 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CDC42EP3 Full Name: CDC42 effector protein 3 Category: mRNA Synonyms: BORG2|CEP3|UB1 Chromosome: chr2 Strand: - Coordinate: Start Site(bp): 37641882 End Site(bp): 37738468 Gene Summary: This gene encodes a member of a small family of guanosine triphosphate (GTP) metabolizing proteins that contain a CRIB (Cdc42, Rac interactive binding) domain. Members of this family of proteins act as effectors of CDC42 function. The encoded protein is involved in actin cytoskeleton re-organization during cell shape changes, including pseudopodia formation. A pseudogene of this gene is found on chromosome 19. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2012] External Links: Ensembl ID: ENSG00000163171 HGNC ID: HGNC:16943 Entrez Gene: 10602

Expression Profile of CDC42EP3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES YES hsa-miR-124-3p YES YES YES hsa-miR-129-5p YES YES YES hsa-miR-140-5p YES YES NO hsa-miR-141-3p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-144-3p YES YES YES hsa-miR-182-5p YES YES NO hsa-miR-183-5p YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-22-3p YES YES NO hsa-miR-24-3p YES YES NO hsa-miR-28-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-378a-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-410-3p YES YES YES hsa-miR-422a YES YES NO hsa-miR-429 YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-582-5p YES NO YES hsa-miR-708-5p YES YES NO Display: