ctcRbase

Entry Detail

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General Information

Database ID: SKCM02991 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: L3HYPDH Full Name: trans-L-3-hydroxyproline dehydratase Category: mRNA Synonyms: C14orf149 Chromosome: chr14 Strand: - Coordinate: Start Site(bp): 59460363 End Site(bp): 59484430 Gene Summary: The protein encoded by this gene is a dehydratase that converts trans-3-hydroxy-L-proline to delta(1)-pyrroline-2-carboxylate. This enzyme may function to degrade dietary proteins that contain trans-3-hydroxy-L-proline as well as other proteins such as collagen IV. The encoded protein can be converted to an epimerase by changing a threonine to a cysteine at a catalytic site. [provided by RefSeq, Sep 2016] External Links: Ensembl ID: ENSG00000126790 HGNC ID: HGNC:20488 Entrez Gene: 112849

Expression Profile of L3HYPDH Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-98-5p YES YES NO Display: