ctcRbase

Entry Detail

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General Information

Database ID: SKCM03096 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: WDFY1 Full Name: WD repeat and FYVE domain containing 1 Category: mRNA Synonyms: FENS-1|FENS1|WDF1|ZFYVE17 Chromosome: chr2 Strand: - Coordinate: Start Site(bp): 223855716 End Site(bp): 223945387 Gene Summary: The protein encoded by this gene is a phosphatidylinositol 3-phosphate binding protein, which contains a FYVE zinc finger domain and multiple WD-40 repeat domains. When exogenously expressed, it localizes to early endosomes. Mutagenesis analysis demonstrates that this endosomal localization is mediated by the FYVE domain. [provided by RefSeq, Jan 2015] External Links: Ensembl ID: ENSG00000085449 HGNC ID: HGNC:20451 Entrez Gene: 57590

Expression Profile of WDFY1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-130b-3p YES YES NO hsa-miR-134-5p YES YES NO hsa-miR-137 YES YES NO hsa-miR-1-3p YES YES NO hsa-miR-140-3p YES NO YES hsa-miR-155-5p YES YES NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-183-5p YES YES NO hsa-miR-191-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-206 YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-218-5p YES YES NO hsa-miR-223-3p YES YES NO hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-326 YES YES YES hsa-miR-329-3p YES YES NO hsa-miR-330-5p YES YES YES hsa-miR-362-3p YES YES NO hsa-miR-365a-3p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-429 YES YES NO hsa-miR-448 YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-599 YES YES NO hsa-miR-613 YES YES NO hsa-miR-625-5p YES NO NO hsa-miR-873-5p YES YES NO Display: