ctcRbase

Entry Detail

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General Information

Database ID: SKCM03098 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TRMT5 Full Name: tRNA methyltransferase 5 Category: mRNA Synonyms: COXPD26|KIAA1393|TRM5 Chromosome: chr14 Strand: - Coordinate: Start Site(bp): 60971451 End Site(bp): 60981358 Gene Summary: tRNAs contain as many as 13 or 14 nucleotides that are modified posttranscriptionally by enzymes that are highly specific for particular nucleotides in the tRNA structure. TRMT5 methylates the N1 position of guanosine-37 (G37) in selected tRNAs using S-adenosyl methionine (Brule et al., 2004 [PubMed 15248782]).[supplied by OMIM, Mar 2008] External Links: Ensembl ID: ENSG00000126814 HGNC ID: HGNC:23141 Entrez Gene: 57570

Expression Profile of TRMT5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-125a-5p YES YES NO hsa-miR-125b-5p YES YES NO hsa-miR-144-3p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-21-5p YES NO YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-590-5p YES NO YES hsa-miR-93-5p YES YES NO Display: