ctcRbase

Entry Detail

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General Information

Database ID: SKCM03105 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: PRPF4B Full Name: pre-mRNA processing factor 4B Category: mRNA Synonyms: PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 Chromosome: chr6 Strand: + Coordinate: Start Site(bp): 4021267 End Site(bp): 4064983 Gene Summary: Pre-mRNA splicing occurs in two sequential transesterification steps, and the protein encoded by this gene is thought to be involved in pre-mRNA splicing and in signal transduction. This protein belongs to a kinase family that includes serine/arginine-rich protein-specific kinases and cyclin-dependent kinases (CDKs). This protein is regarded as a CDK-like kinase (Clk) with homology to mitogen-activated protein kinases (MAPKs). [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000112739 HGNC ID: HGNC:17346 Entrez Gene: 8899

Expression Profile of PRPF4B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-139-5p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-182-5p YES YES YES hsa-miR-196a-5p YES YES NO hsa-miR-196b-5p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-21-5p YES NO YES hsa-miR-216a-5p YES YES NO hsa-miR-223-3p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-329-3p YES YES YES hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES YES YES hsa-miR-371a-5p YES YES YES hsa-miR-375 YES NO YES hsa-miR-377-3p YES YES NO hsa-miR-452-5p YES NO YES hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-532-5p YES NO YES hsa-miR-543 YES YES NO hsa-miR-590-5p YES NO YES hsa-miR-7-5p YES YES NO Display: