ctcRbase

Entry Detail

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General Information

Database ID: SKCM03107 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TPR Full Name: translocated promoter region, nuclear basket protein Category: mRNA Synonyms: - Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 186311652 End Site(bp): 186375693 Gene Summary: This gene encodes a large coiled-coil protein that forms intranuclear filaments attached to the inner surface of nuclear pore complexes (NPCs). The protein directly interacts with several components of the NPC. It is required for the nuclear export of mRNAs and some proteins. Oncogenic fusions of the 5' end of this gene with several different kinase genes occur in some neoplasias. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000047410 HGNC ID: HGNC:12017 Entrez Gene: 7175

Expression Profile of TPR Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES NO hsa-miR-145-5p YES YES NO hsa-miR-146a-5p YES YES NO hsa-miR-154-5p YES YES NO hsa-miR-183-5p YES YES NO hsa-miR-186-5p YES YES YES hsa-miR-205-5p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-383-5p YES YES NO hsa-miR-409-5p YES NO YES hsa-miR-410-3p YES YES NO hsa-miR-499a-5p YES YES NO hsa-miR-532-5p YES NO YES hsa-miR-543 YES YES NO hsa-miR-96-5p YES YES NO Display: