ctcRbase

Entry Detail

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General Information

Database ID: SKCM03121 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ZBTB38 Full Name: zinc finger and BTB domain containing 38 Category: mRNA Synonyms: CIBZ|PPP1R171|ZNF921 Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 141324213 End Site(bp): 141449792 Gene Summary: The protein encoded by this gene is a zinc finger transcriptional activator that binds methylated DNA. The encoded protein can form homodimers or heterodimers through the zinc finger domains. In mouse, inhibition of this protein has been associated with apoptosis in some cell types. [provided by RefSeq, Jun 2010] External Links: Ensembl ID: ENSG00000177311 HGNC ID: HGNC:26636 Entrez Gene: 253461

Expression Profile of ZBTB38 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES NO YES hsa-miR-129-2-3p YES NO YES hsa-miR-1297 YES YES YES hsa-miR-130a-3p YES YES NO hsa-miR-133a-3p YES YES YES hsa-miR-133b YES YES YES hsa-miR-137 YES NO YES hsa-miR-139-5p YES YES NO hsa-miR-1-3p YES YES NO hsa-miR-140-3p YES NO YES hsa-miR-142-3p YES YES NO hsa-miR-144-3p YES YES YES hsa-miR-155-5p YES YES YES hsa-miR-185-5p YES NO NO hsa-miR-192-5p YES YES NO hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-205-5p YES NO YES hsa-miR-206 YES YES NO hsa-miR-215-5p YES YES NO hsa-miR-22-3p YES YES NO hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-300 YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-342-3p YES YES NO hsa-miR-361-5p YES YES YES hsa-miR-369-3p YES NO YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-411-5p YES YES NO hsa-miR-429 YES YES YES hsa-miR-483-3p YES NO YES hsa-miR-506-3p YES NO YES hsa-miR-613 YES YES NO hsa-miR-758-3p YES YES YES hsa-miR-7-5p YES YES YES hsa-miR-760 YES NO YES hsa-miR-9-5p YES YES YES Display: