Entry Detail



General Information

Database ID:SKCM03124
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:SGCE
Full Name:sarcoglycan epsilon
Category:mRNA
Synonyms:DYT11|ESG|epsilon-SG
Chromosome:chr7
Strand:-
Coordinate:
Start Site(bp):94585230End Site(bp):94656209
Gene Summary:This gene encodes the epsilon member of the sarcoglycan family. Sarcoglycans are transmembrane proteins that are components of the dystrophin-glycoprotein complex, which link the actin cytoskeleton to the extracellular matrix. Unlike other family members which are predominantly expressed in striated muscle, the epsilon sarcoglycan is more broadly expressed. Mutations in this gene are associated with myoclonus-dystonia syndrome. This gene is imprinted, with preferential expression from the paternal allele. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. A pseudogene associated with this gene is located on chromosome 2. [provided by RefSeq, Oct 2016]
External Links:
Ensembl ID:ENSG00000127990
HGNC ID:HGNC:10808
Entrez Gene:8910



Expression Profile of SGCE Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-142-5p
YES
NO
YES
hsa-miR-186-5p
YES
YES
NO
hsa-miR-194-5p
YES
YES
YES
hsa-miR-200b-3p
YES
YES
YES
hsa-miR-200c-3p
YES
YES
YES
hsa-miR-224-5p
YES
YES
NO
hsa-miR-340-5p
YES
YES
YES
hsa-miR-410-3p
YES
YES
NO
hsa-miR-429
YES
YES
YES
hsa-miR-488-3p
YES
YES
NO
hsa-miR-495-3p
YES
YES
YES
hsa-miR-7-5p
YES
YES
NO
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