ctcRbase

Entry Detail

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General Information

Database ID: SKCM03157 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: PXN Full Name: paxillin Category: mRNA Synonyms: - Chromosome: chr12 Strand: - Coordinate: Start Site(bp): 120210439 End Site(bp): 120265771 Gene Summary: This gene encodes a cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Alternatively spliced transcript variants encoding different isoforms have been described for this gene. These isoforms exhibit different expression pattern, and have different biochemical, as well as physiological properties (PMID:9054445). [provided by RefSeq, Aug 2011] External Links: Ensembl ID: ENSG00000089159 HGNC ID: HGNC:9718 Entrez Gene: 5829

Expression Profile of PXN Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES NO YES hsa-miR-132-3p YES YES YES hsa-miR-137 YES YES YES hsa-miR-145-5p YES YES YES hsa-miR-199a-3p YES NO YES hsa-miR-199a-5p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-199b-5p YES NO YES hsa-miR-204-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-212-3p YES YES YES hsa-miR-216a-5p YES NO YES hsa-miR-216b-5p YES YES YES hsa-miR-218-5p YES NO YES hsa-miR-24-3p YES YES NO hsa-miR-27a-3p YES NO YES hsa-miR-27b-3p YES NO YES hsa-miR-335-5p YES YES NO hsa-miR-7-5p YES YES NO Display: